PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr1P14400_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 167aa    MW: 18618.4 Da    PI: 11.1573
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr1P14400_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.11.5e-0890130954
                            HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                    HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                             rrRR+ri +++  L++l+P        K++ a++L +A +Y+k L
  GSMUA_Achr1P14400_001  90 ARRRRERISERLRVLQRLVPGG-----SKMDTATMLDEAANYLKFL 130
                            69******************95.....5****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.16181130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.2E-1286139IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.85E-1587144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.4E-1387136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.6E-690130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MASRVSPDPL LPTAKRKPNS SPEEEGLRKN PRSEKHSSSV AIETVAEAKE MIYRAAALRP  60
LTLGMEEAAA AEKPKRKNVK ISSDPQTVAA RRRRERISER LRVLQRLVPG GSKMDTATML  120
DEAANYLKFL KSQVRALETL GERHGHATNS AIHPFPLALN QAFRMQR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17493KRKNVKISSDPQTVAARRRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009401949.11e-117PREDICTED: transcription factor bHLH87-like
SwissprotQ8S3D24e-46BH087_ARATH; Transcription factor bHLH87
TrEMBLM0RZU81e-118M0RZU8_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr1P14400_0011e-117(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP154637106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21330.14e-32bHLH family protein